Papers
The papers in red are preprints, meaning that we think they are ready to be shared. They are thus published in the original meaning of made public, but not peer-reviewed before that. You are most welcome to do so, using Pubpeer or your favourite platform. You are also welcome to review the papers published in standard journals, that have been peer reviewed by a couple of colleagues, but the more the better. You can again use Pubpeer.Also, the journal names are not listed. This is to get a less biased view, in my opinion.
A list of the publications properly curated by a librarian is at the UGent library dedicated page. According to Belgian law, all papers stored there as postprint version are open access after six to twelve months from publication in the journal.
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Decomposing Multivariate Information Rates in Networks of Random Processes
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Partial Information Rate Decomposition
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A hitchhiker’s guide to information theoretical measures in psychology
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The influence of the head model on magnetoencephalography-derived functional connectivity fingerprinting
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Information-Theoretic Progress Measures reveal Grokking is an Emergent Phase Transition
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Predicting aging-related decline in physical performance with sparse electrophysiological source imaging
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Higher-order mutual information reveals synergistic sub-networks for multi-neuron importance
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A review of ideas and strategies to improve scientific research and its dissemination in life and social sciences
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PRINCIPIA: a Decentralized Peer-Review Ecosystem
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Evaluating the performance of 3-tissue constrained spherical deconvolution pipelines for within-tumor tractography
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Multiscale Granger causality analysis by à trous wavelet transform
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Retrieving the Hemodynamic Response Function in resting state fMRI: methodology and applications
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High-order information analysis of epileptogenesis in the pilocarpine rat model of temporal lobe epilepsy
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Assessing high-order effects in feature importance via predictability decomposition
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Network Representation of Higher-Order Interactions Based on Information Dynamics
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Investigating cognitive-physical task interaction during self-paced cycling: a Granger Causality study
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Large language models surpass human experts in predicting neuroscience results
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Reliable measurement of auditory-driven gamma synchrony with a single EEG electrode: a simultaneous EEG-MEG study
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An information-theoretic approach to build hypergraph in psychometrics
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Disentangling high-order effects in the transfer entropy
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brainlife.io: a decentralized and open-source cloud platform to support neuroscience research
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The coming decade of digital brain research: A vision for neuroscience at the intersection of technology and computing
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Assessing High-Order Links in Cardiovascular and Respiratory Networks via Static and Dynamic Information Measures
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Cognitive modelling of concepts in the mental lexicon with multilayer networks: Insights, advancements, and future challenges
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Intra-V1 functional networks and classification of observed stimuli
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Assessing cortical excitability with electroencephalography: A pilot study with EEG-iTBS
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Gradients of O-information highlight synergy and redundancy in physiological applications
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The impact of ROI extraction method for MEG connectivity estimation: practical recommendations for the study of resting state data
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Task matters: individual MEG signatures from naturalistic and neurophysiological brain states
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Reduced connectivity of primary auditory and motor cortices during exposure to auditory white noise
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Gradients of O-information: low-order descriptors of high-order dependencies
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Frontal effective connectivity increases with task demands and time on task: a Dynamic Causal Model of electrocorticogram in macaque monkeys
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Dynamic causal modelling shows a prominent role of local inhibition in alpha power modulation in higher visual cortex
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A New Framework for the Time- and Frequency-Domain Assessment of High-Order Interactions in Networks of Random Processes
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Pre- and post-surgery brain tumor multimodal magnetic resonance imaging data optimized for large scale computational modelling
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WHOCARES: data-driven WHOle-brain CArdiac signal REgression from highly accelerated simultaneous multi-Slice fMRI acquisitions
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Approaching or Decentering? Differential Neural Networks Underlying Experiential Emotion Regulation and Cognitive Defusion
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Investigation on How Dynamic Effective Connectivity Patterns Encode the Fluctuating Pain Intensity in Chronic Migraine
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Theta-phase connectivity between medial prefrontal and posterior areas underlies novel instructions implementation
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Auditory driven gamma synchrony is associated with cortical thickness in widespread cortical areas
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Disentangling high-order mechanisms and high-order behaviours in complex systems
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Individual differences in mental imagery modulate effective connectivity of scene-selective regions during resting state
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Quantifying high-order interdependencies on individual patterns via the local O-information: theory and applications to music analysis
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Brain simulation as a cloud service: The Virtual Brain on EBRAINS
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Measuring High-Order Interactions in Rhythmic Processes through Multivariate Spectral Information Decomposition
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Extending the spectral decomposition of Granger causality to include instantaneous influences: application to the control mechanisms of heart rate variability
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rsHRF: A Toolbox for Resting-State HRF Estimation and Deconvolution
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Beyond pairwise network similarity: exploring Mediation and Suppression between networks
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Brainhack : developing a culture of open, inclusive, community-driven neuroscience
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How hot is the hot zone? Computational modelling clarifies the role of parietal and frontoparietal connectivity during anaesthetic-induced loss of consciousness: Computational modelling of anaesthetic-induced LOC
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Quantifying dynamical high-order interdependencies from the O-information: an application to neural spiking dynamics
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Multivariate Correlation Measures Reveal Structure and Strength of Brain-Body Physiological Networks at Rest and During Mental Stress
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Dynamic Causal Modelling of the Reduced Habituation to Painful Stimuli in Migraine: An EEG Study
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Complete hemispherotomy leads to lateralized functional organization and lower level of consciousness in the isolated hemisphere
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Synergistic Information Transfer in the Global System of Financial Markets
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A mean field approach to model levels of consciousness from EEG recordings
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The effect of painful laser stimuli on EEG gamma-band activity in migraine patients and healthy controls
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Synergistic information in a dynamical model implemented on the human structural connectome reveals spatially distinct associations with age
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Disambiguating the role of blood flow and global signal with Partial Information Decomposition
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Modeling brain dynamics after tumor resection using The Virtual Brain
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The influence of nociceptive and neuropathic pain states on the processing of acute electrical nociceptive stimulation: A dynamic causal modeling study
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Objects seen as scenes: neural circuitry for attending whole or parts
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The effect of global signal regression on DCM estimates of noise and effective connectivity from resting state fMRI
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Effective connectivity modulations related to win and loss outcomes.
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Advancing functional connectivity research from association to causation
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The interplay between emotion regulation, emotional well-being, and cognitive functioning in brain tumor patients and their caregivers: An exploratory study
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Information decomposition of multichannel EMG to map functional interactions in the distributed motor system[journal page]
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Modulation of the spontaneous hemodynamic response function across levels of consciousness
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Multiscale Information Decomposition Dissects Control Mechanisms of Heart Rate Variability at Rest and During Physiological Stress
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Electrophysiological Brain Connectivity: Theory and Implementation
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Deletion of autism risk gene Shank3 disrupts prefrontal connectivity
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Controversies in EEG Source Imaging and Connectivity: Modeling, Validation, Benchmarking
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Synergy as a warning sign of transitions: the case of the two-dimensional Ising model
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Quantifying the Effect of Demixing Approaches on Directed Connectivity Estimated Between Reconstructed EEG Sources
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Mapping attention during gameplay: Assessment of behavioral and ERP markers in an auditory oddball task
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Dynamic causal modelling of fluctuating connectivity in resting-state EEG
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Connectome preprocessing by Consensus Clustering increases separability in group neuroimaging studies
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Functional Connectivity Hubs and Thalamic Hemodynamics in Rolandic Epilepsy
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Predicting functional networks from region connectivity profiles in task-based versus resting-state fMRI data
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Variability and reliability of effective connectivity within the core default mode network: A longitudinal spectral DCM study
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Modeling brain dynamics in brain tumor patients using The Virtual Brain
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Hemodynamic response function (HRF) variability confounds resting-state fMRI functional connectivity
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Dilution of Ferromagnets via a Random Graph-based Strategy
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Parameterized hemodynamic response function data of healthy individuals obtained from resting-state functional MRI in a 7T MRI scanner
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Evolutionary Dynamics of Group Formation
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On the interpretability and computational reliability of frequency-domain Granger causality
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Multiscale Granger causality
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Multifaceted brain networks reconfiguration in disorders of consciousness uncovered by co-activation patterns
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Multiscale Information Decomposition: Exact Computation for Multivariate Gaussian Processes
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Consensus clustering approach to group brain connectivity matrices
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Visibility graphs for fMRI data: multiplex temporal graphs and their modulations across resting state networks
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Ising Model with conserved magnetization on the Human Connectome: implications on the relation structure-function in wakefulness and anesthesia
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Enhanced pre-frontal functional-structural networks to support postural control deficits after traumatic brain injury in a pediatric population
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Mapping the functional connectome traits of levels of consciousness
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Tracking dynamic interactions between structural and functional connectivity: a TMS/EEG-dMRI study
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Critical comments on EEG sensor space dynamical connectivity analysis
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Brain networks under attack: robustness properties and the impact of lesions
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Dynamic causal modelling of seizure activity in a rat model
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Synergetic and redundant information flow detected by unnormalized Granger causality: application to resting state fMRI
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An Information-Theoretic Framework to Map the Spatio-Temporal Dynamics of the Scalp Electroencephalogram
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Vagus Nerve Stimulation Applied with a Rapid Cycle Has More Profound Influence on Hippocampal Electrophysiology Than a Standard Cycle
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Sensitivity of the resting state hemodynamic response function estimation to autonomic nervous system fluctuations
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Predictability decomposition detects the impairment of brain-heart dynamical networks during sleep disorders and their recovery with treatment
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Functional Connectivity of EEG Signals Under Laser Stimulation in Migraine
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Accelerated HF-rTMS protocol has a rate-dependent effect on dACC activation in alcohol-dependent patients: an open-label feasibility study
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Identification of redundant and synergetic circuits in triplets of electrophysiological data
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Estimating directed connectivity from cortical recordings and reconstructed sources
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Neural networks with non-uniform embedding and explicit validation phase to assess Granger causality
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Lagged and instantaneous dynamical influences related to brain structural connectivity
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Information flow between resting state networks
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Cardiorespiratory Information Dynamics during Mental Arithmetic and Sustained Attention
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Linear and non-linear brain-heart and brain-brain interactions during sleep
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Interictal cardiorespiratory variability in temporal lobe and absence epilepsy in childhood
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Estimating the decomposition of predictive information in multivariate systems
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The impact of accelerated HF-rTMS on the subgenual Anterior Cingulate Cortex in refractory unipolar major depression: insights from 18FDG PET brain imaging
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Resting-state functional connectivity of the sensorimotor network in individuals with non-specific low back pain and the association with the sit-to-stand-to-sit task
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Tracking slow modulations in synaptic gain using Dynamic Causal Modelling: validation in epilepsy
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Editorial for the Research Topic: Information-based methods for neuroimaging: analyzing structure, function and dynamics
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Interictal cardiorespiratory variability in temporal lobe and absence epilepsy in childhood
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Information dynamics of brain-heart physiological networks during sleep
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Functional connectivity density and balance in young patients with traumatic axonal injury
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Point-process deconvolution of fMRI BOLD signal reveals effective connectivity alterations in chronic pain patients
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MuTE: a MATLAB toolbox to compare established and novel estimators of the multivariate transfer entropy
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Synergy and redundancy in the Granger causal analysis of dynamical networks
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Functional Brain Connectivity from EEG in Epilepsy: Seizure Prediction and Epileptogenic Focus Localization
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Posterior cingulate cortex-related co-activation patterns: a resting state fMRI study in propofol-induced loss of consciousness
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COMT Val158Met genotypes differentially influence subgenual cingulate functional connectivity in healthy females
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Lag-specific Transfer Entropy as a Tool to Assess Cardiovascular and Cardiorespiratory Information Transfer
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The Touch and Zap Method for In Vivo Whole-Cell Patch Recording of Intrinsic and Visual Responses of Cortical Neurons and Glial Cells
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Left and Right Amygdala - Mediofrontal Cortical Functional Connectivity Is Differentially Modulated by Harm Avoidance
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Information Transfer and Criticality in the Ising Model on the Human Connectome
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Altered processing of sensory stimuli in patients with migraine
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Directed Information Transfer in scalp electroencephalographic recordings: insights on disorders of consciousness
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Accelerated HF-rTMS in treatment-resistant unipolar depression: insights from subgenual anterior cingulate functional connectivity
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Mapping the voxel-wise effective connectome in resting state fMRI
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Recovering directed networks in neuroimaging datasets using partially conditioned Granger causality[1222 KB pdf]
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A blind deconvolution approach to recover effective connectivity brain networks from resting state fMRI data[1750 KB pdf]
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Functional and effective connectivity in EEG alpha and beta bands during intermittent flash stimulation in migraine with and without aura
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Expanding the transfer entropy to identify information circuits in complex systems[1980 KB pdf]
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Mapping the epileptic brain with EEG dynamical connectivity: established methods and novel approaches[552 KB pdf]
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Information flow in networks and the law of diminishing marginal returns: evidence from modeling and human electroencephalographic recordings
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Causal information approach to partial conditioning in multivariate data sets
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Neural adaptation while preserving coding accuracy[883 KB pdf]
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Multi-scale causal connectivity analysis by canonical correlation: theory and application to epileptic brain[1185 KB pdf]
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Nonlinear connectivity by Granger causality[660 KB pdf]
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Small-world Directed Networks in the Human Brain: Multivariate Granger Causality Analysis of Resting State fMRI[2450 KB pdf]
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Grouping time series by pairwise measures of redundancy[84 KB pdf]
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Redundant variables and Granger causality[84 KB pdf]
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Kernel Granger Causality Mapping Effective Connectivity on fMRI Data[645 KB pdf]
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Kernel Granger causality and the analysis of dynamical networks[208 KB pdf]
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Kernel method for nonlinear Granger causality[236 KB pdf]
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Semi-supervised learning by search of optimal target vector[180 KB pdf]
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Input-driven oscillations in networks with excitatory and inhibitory neurons with dynamic synapses[1964 KB pdf]
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Effects of Levetiracetam vs Topiramate and placebo on visually evoked phase synchronization changes of alpha rhythm in migraine patients[456 KB pdf]
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Phase diagram of a generalized Winfree model[151 KB pdf]
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Multiscale analysis of short term heart beat interval, arterial blood pressure, and instantaneous lung volume time series[885 KB pdf]
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Natural clustering: the modularity approach[191 KB pdf]
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Identification of network modules by optimization of ratio association[191 KB pdf]
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Nonlinear parametric model for Granger causality of time series[103 KB pdf]
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Kernel method for clustering based on optimal target vector[116 KB pdf]
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The measure of randomness by leave-one-out prediction error in the analysis of EEG after laser painful stimulation in healthy subjects and migraine patients[378 KB pdf]
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Measuring randomness by leave-one-out prediction error. Analysis of EEG after painful stimulation[241 KB pdf]
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Leave-one-out prediction error of systolic arterial pressure time series under paced breathing[143 KB pdf]
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Visually evoked phase synchronization changes of alpha rhythm in migraine. Correlations with clinical features[261 KB pdf]
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A Radial Basis Function approach to nonlinear Granger causality of time series[121 KB pdf]
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Phase shifts of synchronized oscillators and the systolic-diastolic blood pressure relation[158 KB pdf]
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Steady-state visual evoked potentials and phase synchronization in migraine patients[133 KB pdf]